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Coding PHP + Concrete5

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I have installed concrete5 and set it up to work with my design and all is well, but I have no idea where to put my PHP code, I mean I could create .php files like before and use standard links to them but then they would not be part of the CMS . I have looked around but there is no info on what to do after you have installed the CMS if you are a developer and need to continue building the site. Did I miss something vital, or do I have to keep my own code in separate files and manage them outside of concrete5?
 
Remo replied on at Permalink Reply
Remo
first you should understand the idea of blocks. for this you don't need to be a developer.

later single pages and packages might be useful too..

and there are a few pages especially made for developers:

http://www.concrete5.org/help/building_with_concrete5/developer_int...

http://www.concrete5.org/help/building_with_concrete5/developers...
Jotun replied on at Permalink Reply
Thanks for the links, I see how to create custom blocks, but am still not sure which file I would use to create my own PHP functions, basically I just want to start coding somewhere and build my own functionality for manipulating the database in various ways. Thanks for the help!